implement correct status handling and add snakemake profile

zoidberg_lib/src/types.rs

@@ -1,7 +1,64 @@
+use std::fmt;
+
 use serde::{Deserialize, Serialize};
 
 #[derive(Serialize, Deserialize)]
 pub struct Update {
-    pub id: i64,
-    pub status: String,
+    pub worker: i32,
+    pub job: i32,
+    pub status: Status,
+}
+
+#[derive(Serialize, Deserialize, Clone, Debug)]
+pub enum Status {
+    Submitted,
+    Running,
+    Completed,
+    Failed,
+}
+
+impl Status {
+    fn default() -> Self {
+        Status::Submitted
+    }
+}
+
+impl fmt::Display for Status {
+    fn fmt(self: &Self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
+        match self {
+            Status::Submitted => write!(f, "submitted"),
+            Status::Running => write!(f, "running"),
+            Status::Completed => write!(f, "completed"),
+            Status::Failed => write!(f, "failed"),
+        }
+    }
+}
+
+#[derive(Serialize, Deserialize, Clone, Debug)]
+pub struct StatusRequest {
+    pub id: i32,
+}
+
+#[derive(Serialize, Deserialize, Clone, Debug)]
+pub struct Job {
+    #[serde(default)]
+    pub id: i32,
+    pub cmd: String,
+    #[serde(default = "Status::default")]
+    pub status: Status,
+}
+
+#[derive(Serialize, Deserialize)]
+pub struct Node {
+    pub id: i32,
+}
+
+#[derive(Serialize, Deserialize)]
+pub struct RegisterResponse {
+    pub id: i32,
+}
+
+#[derive(Serialize, Deserialize)]
+pub struct Submit {
+    pub cmd: String,
 }