From 47c453ff82c84e38341fcb109324c981602782ee Mon Sep 17 00:00:00 2001 From: Johannes Heuel Date: Mon, 19 Sep 2022 09:07:54 +0200 Subject: [PATCH] clean up directory structure --- {snakemake => submitters/snakemake}/Snakefile | 2 +- {snakemake => submitters/snakemake}/zoidberg/config.yaml | 0 {snakemake => submitters/snakemake}/zoidberg/grid-jobscript.sh | 0 {snakemake => submitters/snakemake}/zoidberg/grid-status.py | 0 {snakemake => submitters/snakemake}/zoidberg/grid-submit.py | 0 5 files changed, 1 insertion(+), 1 deletion(-) rename {snakemake => submitters/snakemake}/Snakefile (87%) rename {snakemake => submitters/snakemake}/zoidberg/config.yaml (100%) rename {snakemake => submitters/snakemake}/zoidberg/grid-jobscript.sh (100%) rename {snakemake => submitters/snakemake}/zoidberg/grid-status.py (100%) rename {snakemake => submitters/snakemake}/zoidberg/grid-submit.py (100%) diff --git a/snakemake/Snakefile b/submitters/snakemake/Snakefile similarity index 87% rename from snakemake/Snakefile rename to submitters/snakemake/Snakefile index 4f584ad..dec8628 100644 --- a/snakemake/Snakefile +++ b/submitters/snakemake/Snakefile @@ -1,4 +1,4 @@ -rule collect: +rule collect_and_delete: input: [f"{i}.txt" for i in range(100)], run: diff --git a/snakemake/zoidberg/config.yaml b/submitters/snakemake/zoidberg/config.yaml similarity index 100% rename from snakemake/zoidberg/config.yaml rename to submitters/snakemake/zoidberg/config.yaml diff --git a/snakemake/zoidberg/grid-jobscript.sh b/submitters/snakemake/zoidberg/grid-jobscript.sh similarity index 100% rename from snakemake/zoidberg/grid-jobscript.sh rename to submitters/snakemake/zoidberg/grid-jobscript.sh diff --git a/snakemake/zoidberg/grid-status.py b/submitters/snakemake/zoidberg/grid-status.py similarity index 100% rename from snakemake/zoidberg/grid-status.py rename to submitters/snakemake/zoidberg/grid-status.py diff --git a/snakemake/zoidberg/grid-submit.py b/submitters/snakemake/zoidberg/grid-submit.py similarity index 100% rename from snakemake/zoidberg/grid-submit.py rename to submitters/snakemake/zoidberg/grid-submit.py